Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc11P31313 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc11P31313 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc11P31313 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc11P31313 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc11P31313 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc11P31313 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc11P31313 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.21□□□□□ -0.46
Hoxc11P31313 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hoxc11P31313 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.2□□□□□ -0.46
Hoxc11P31313 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gm26956-201ENSMUST00000182176 986 ntBASIC12.2□□□□□ -0.46
Hoxc11P31313 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gm30285-201ENSMUST00000214614 422 ntBASIC12.2□□□□□ -0.46
Hoxc11P31313 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.2□□□□□ -0.46
Hoxc11P31313 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hoxc11P31313 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Hoxc11P31313 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.19□□□□□ -0.46
Hoxc11P31313 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.19□□□□□ -0.46
Hoxc11P31313 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxc11P31313 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.19□□□□□ -0.46
Hoxc11P31313 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.19□□□□□ -0.46
Hoxc11P31313 Gm12291-201ENSMUST00000121627 311 ntBASIC12.19□□□□□ -0.46
Hoxc11P31313 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.19□□□□□ -0.46
Hoxc11P31313 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Hoxc11P31313 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.19□□□□□ -0.46
Hoxc11P31313 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.19□□□□□ -0.46
Hoxc11P31313 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.19□□□□□ -0.46
Hoxc11P31313 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxc11P31313 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc11P31313 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxc11P31313 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hoxc11P31313 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.18□□□□□ -0.46
Hoxc11P31313 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.18□□□□□ -0.46
Hoxc11P31313 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxc11P31313 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxc11P31313 Gm14921-201ENSMUST00000118643 908 ntBASIC12.18□□□□□ -0.46
Hoxc11P31313 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc11P31313 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.18□□□□□ -0.46
Hoxc11P31313 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms