Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nckap1P28660 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.54□□□□□ -0.4
Nckap1P28660 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Nckap1P28660 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.54□□□□□ -0.4
Nckap1P28660 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.54□□□□□ -0.4
Nckap1P28660 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.54□□□□□ -0.4
Nckap1P28660 Gm45186-201ENSMUST00000206874 478 ntBASIC12.54□□□□□ -0.4
Nckap1P28660 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.54□□□□□ -0.4
Nckap1P28660 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nckap1P28660 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Nckap1P28660 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.53□□□□□ -0.4
Nckap1P28660 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Nckap1P28660 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Nckap1P28660 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.53□□□□□ -0.4
Nckap1P28660 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.53□□□□□ -0.4
Nckap1P28660 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Nckap1P28660 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.53□□□□□ -0.4
Nckap1P28660 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.53□□□□□ -0.4
Nckap1P28660 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nckap1P28660 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.53□□□□□ -0.4
Nckap1P28660 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.53□□□□□ -0.4
Nckap1P28660 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.53□□□□□ -0.4
Nckap1P28660 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Nckap1P28660 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nckap1P28660 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Nckap1P28660 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nckap1P28660 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nckap1P28660 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nckap1P28660 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nckap1P28660 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nckap1P28660 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nckap1P28660 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nckap1P28660 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
Nckap1P28660 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nckap1P28660 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nckap1P28660 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nckap1P28660 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nckap1P28660 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nckap1P28660 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nckap1P28660 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nckap1P28660 Gm13570-201ENSMUST00000140763 309 ntBASIC12.52□□□□□ -0.41
Nckap1P28660 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.52□□□□□ -0.41
Nckap1P28660 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nckap1P28660 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.52□□□□□ -0.41
Nckap1P28660 Mir7070-201ENSMUST00000183657 86 ntBASIC12.52□□□□□ -0.41
Nckap1P28660 Gm8885-201ENSMUST00000189382 598 ntBASIC12.52□□□□□ -0.41
Nckap1P28660 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.52□□□□□ -0.41
Nckap1P28660 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nckap1P28660 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.52□□□□□ -0.41
Nckap1P28660 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nckap1P28660 Gm10076-201ENSMUST00000073238 384 ntBASIC12.52□□□□□ -0.41
Nckap1P28660 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nckap1P28660 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nckap1P28660 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nckap1P28660 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.52□□□□□ -0.41
Nckap1P28660 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nckap1P28660 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nckap1P28660 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms