Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
BrafP28028 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BrafP28028 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
BrafP28028 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
BrafP28028 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.31□□□□□ -0.44
BrafP28028 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
BrafP28028 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Gm11814-201ENSMUST00000119515 929 ntBASIC12.31□□□□□ -0.44
BrafP28028 Gm10156-201ENSMUST00000122364 462 ntBASIC12.31□□□□□ -0.44
BrafP28028 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.31□□□□□ -0.44
BrafP28028 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.31□□□□□ -0.44
BrafP28028 Proscos-202ENSMUST00000178990 666 ntBASIC12.31□□□□□ -0.44
BrafP28028 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.31□□□□□ -0.44
BrafP28028 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
BrafP28028 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.31□□□□□ -0.44
BrafP28028 Gm37922-201ENSMUST00000195596 455 ntBASIC12.31□□□□□ -0.44
BrafP28028 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.31□□□□□ -0.44
BrafP28028 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.31□□□□□ -0.44
BrafP28028 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
BrafP28028 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.31□□□□□ -0.44
BrafP28028 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
BrafP28028 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
BrafP28028 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
BrafP28028 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
BrafP28028 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BrafP28028 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.3□□□□□ -0.44
BrafP28028 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
BrafP28028 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.3□□□□□ -0.44
BrafP28028 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.3□□□□□ -0.44
BrafP28028 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.3□□□□□ -0.44
BrafP28028 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.3□□□□□ -0.44
BrafP28028 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
BrafP28028 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Gm28693-202ENSMUST00000190758 331 ntBASIC12.3□□□□□ -0.44
BrafP28028 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.3□□□□□ -0.44
BrafP28028 Gm8598-201ENSMUST00000221184 836 ntBASIC12.3□□□□□ -0.44
BrafP28028 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.3□□□□□ -0.44
BrafP28028 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.3□□□□□ -0.44
BrafP28028 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.3□□□□□ -0.44
BrafP28028 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.3□□□□□ -0.44
BrafP28028 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.3□□□□□ -0.44
BrafP28028 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
BrafP28028 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.3□□□□□ -0.44
BrafP28028 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BrafP28028 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.29□□□□□ -0.44
BrafP28028 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
BrafP28028 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BrafP28028 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
BrafP28028 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BrafP28028 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BrafP28028 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
BrafP28028 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BrafP28028 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
BrafP28028 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
BrafP28028 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms