Protein–RNA interactions for Protein: P0DOY1

Dnmt3c, DNA (cytosine-5)-methyltransferase 3C, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3cP0DOY1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Dnmt3cP0DOY1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Gm38002-201ENSMUST00000193255 180 ntBASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Dnmt3cP0DOY1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Gm15703-201ENSMUST00000120250 880 ntBASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Gm18054-201ENSMUST00000207539 555 ntBASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Gm45880-201ENSMUST00000213041 853 ntBASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Dnmt3cP0DOY1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Dnmt3cP0DOY1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms