Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Hoxc9P09633 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hoxc9P09633 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Hoxc9P09633 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Gm43184-201ENSMUST00000197247 542 ntBASIC16.18■□□□□ 0.18
Hoxc9P09633 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC16.18■□□□□ 0.18
Hoxc9P09633 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 AC171277.1-201ENSMUST00000216902 1441 ntBASIC16.18■□□□□ 0.18
Hoxc9P09633 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hoxc9P09633 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hoxc9P09633 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.17■□□□□ 0.18
Hoxc9P09633 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hoxc9P09633 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Hoxc9P09633 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Hoxc9P09633 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Hoxc9P09633 Gm11667-201ENSMUST00000119828 486 ntBASIC16.17■□□□□ 0.18
Hoxc9P09633 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Gm44545-201ENSMUST00000208262 746 ntBASIC16.17■□□□□ 0.18
Hoxc9P09633 Gm44551-201ENSMUST00000208804 171 ntBASIC16.17■□□□□ 0.18
Hoxc9P09633 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Hoxc9P09633 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Hoxc9P09633 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hoxc9P09633 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Hoxc9P09633 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Gm44999-201ENSMUST00000207456 1493 ntBASIC16.16■□□□□ 0.18
Hoxc9P09633 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Gm26286-201ENSMUST00000104166 134 ntBASIC16.16■□□□□ 0.18
Hoxc9P09633 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hoxc9P09633 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Gm8343-201ENSMUST00000182705 994 ntBASIC16.16■□□□□ 0.18
Hoxc9P09633 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC16.16■□□□□ 0.18
Hoxc9P09633 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Gm6781-201ENSMUST00000038304 1242 ntBASIC16.16■□□□□ 0.18
Hoxc9P09633 Ginm1-202ENSMUST00000065124 300 ntBASIC16.16■□□□□ 0.18
Hoxc9P09633 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Gm10179-201ENSMUST00000086233 688 ntBASIC16.16■□□□□ 0.18
Hoxc9P09633 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Hoxc9P09633 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hoxc9P09633 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hoxc9P09633 AC126262.1-201ENSMUST00000221802 1904 ntBASIC16.15■□□□□ 0.18
Hoxc9P09633 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Gm9072-201ENSMUST00000218390 1514 ntBASIC16.15■□□□□ 0.18
Hoxc9P09633 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hoxc9P09633 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Hoxc9P09633 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC16.15■□□□□ 0.18
Hoxc9P09633 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hoxc9P09633 Gm12164-201ENSMUST00000121695 551 ntBASIC16.15■□□□□ 0.18
Hoxc9P09633 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms