Protein–RNA interactions for Protein: O88700

Blm, Bloom syndrome protein homolog, mousemouse

Predictions only

Length 1,416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BlmO88700 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BlmO88700 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC19.16■□□□□ 0.66
BlmO88700 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
BlmO88700 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
BlmO88700 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
BlmO88700 Gm15432-201ENSMUST00000121106 195 ntBASIC19.16■□□□□ 0.66
BlmO88700 Gm5732-201ENSMUST00000182596 1007 ntBASIC19.16■□□□□ 0.66
BlmO88700 Gm43830-201ENSMUST00000198760 1067 ntBASIC19.16■□□□□ 0.66
BlmO88700 Mir7686-201ENSMUST00000200604 57 ntBASIC19.16■□□□□ 0.66
BlmO88700 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC19.16■□□□□ 0.66
BlmO88700 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
BlmO88700 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BlmO88700 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC19.15■□□□□ 0.66
BlmO88700 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
BlmO88700 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Gm45706-201ENSMUST00000213063 2136 ntBASIC19.15■□□□□ 0.66
BlmO88700 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC19.15■□□□□ 0.66
BlmO88700 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC19.15■□□□□ 0.66
BlmO88700 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
BlmO88700 AC122876.1-201ENSMUST00000217619 825 ntBASIC19.15■□□□□ 0.66
BlmO88700 AC133602.1-201ENSMUST00000227510 509 ntBASIC19.15■□□□□ 0.66
BlmO88700 Gm26035-201ENSMUST00000083065 308 ntBASIC19.15■□□□□ 0.66
BlmO88700 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BlmO88700 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
BlmO88700 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BlmO88700 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BlmO88700 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BlmO88700 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BlmO88700 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
BlmO88700 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BlmO88700 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC19.14■□□□□ 0.65
BlmO88700 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC19.14■□□□□ 0.65
BlmO88700 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC19.14■□□□□ 0.65
BlmO88700 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC19.14■□□□□ 0.65
BlmO88700 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC19.14■□□□□ 0.65
BlmO88700 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BlmO88700 AC140293.1-201ENSMUST00000225626 1247 ntBASIC19.14■□□□□ 0.65
BlmO88700 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BlmO88700 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BlmO88700 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC19.14■□□□□ 0.65
BlmO88700 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
BlmO88700 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BlmO88700 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BlmO88700 Gm45643-201ENSMUST00000211364 1484 ntBASIC19.13■□□□□ 0.65
BlmO88700 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BlmO88700 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC19.13■□□□□ 0.65
BlmO88700 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BlmO88700 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC19.13■□□□□ 0.65
BlmO88700 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BlmO88700 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BlmO88700 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
BlmO88700 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BlmO88700 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC19.13■□□□□ 0.65
BlmO88700 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC19.13■□□□□ 0.65
BlmO88700 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC19.13■□□□□ 0.65
BlmO88700 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC19.13■□□□□ 0.65
BlmO88700 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BlmO88700 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BlmO88700 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms