Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.35□□□□□ -0.43
ClppO88696 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
ClppO88696 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ClppO88696 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ClppO88696 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.34□□□□□ -0.43
ClppO88696 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ClppO88696 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ClppO88696 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.34□□□□□ -0.43
ClppO88696 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ClppO88696 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ClppO88696 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ClppO88696 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ClppO88696 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ClppO88696 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ClppO88696 Mir874-201ENSMUST00000104769 76 ntBASIC12.34□□□□□ -0.43
ClppO88696 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.34□□□□□ -0.43
ClppO88696 Gm4986-201ENSMUST00000119731 549 ntBASIC12.34□□□□□ -0.43
ClppO88696 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.34□□□□□ -0.43
ClppO88696 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.34□□□□□ -0.43
ClppO88696 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Gm45865-201ENSMUST00000211815 945 ntBASIC12.34□□□□□ -0.43
ClppO88696 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.34□□□□□ -0.43
ClppO88696 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ClppO88696 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ClppO88696 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ClppO88696 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ClppO88696 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ClppO88696 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ClppO88696 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
ClppO88696 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.33□□□□□ -0.44
ClppO88696 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.33□□□□□ -0.44
ClppO88696 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
ClppO88696 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
ClppO88696 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.33□□□□□ -0.44
ClppO88696 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.33□□□□□ -0.44
ClppO88696 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.33□□□□□ -0.44
ClppO88696 Gm12363-201ENSMUST00000122250 668 ntBASIC12.33□□□□□ -0.44
ClppO88696 Gm7584-201ENSMUST00000175829 940 ntBASIC12.33□□□□□ -0.44
ClppO88696 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
ClppO88696 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.33□□□□□ -0.44
ClppO88696 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.33□□□□□ -0.44
ClppO88696 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
ClppO88696 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
ClppO88696 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ClppO88696 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.33□□□□□ -0.44
ClppO88696 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ClppO88696 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms