Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.92□□□□□ -0.02
Hdac1O09106 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Hdac1O09106 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.92□□□□□ -0.02
Hdac1O09106 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac1O09106 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Hdac1O09106 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.91□□□□□ -0.02
Hdac1O09106 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.91□□□□□ -0.02
Hdac1O09106 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.91□□□□□ -0.02
Hdac1O09106 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.91□□□□□ -0.02
Hdac1O09106 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.91□□□□□ -0.02
Hdac1O09106 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.91□□□□□ -0.02
Hdac1O09106 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.91□□□□□ -0.02
Hdac1O09106 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.91□□□□□ -0.02
Hdac1O09106 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.91□□□□□ -0.02
Hdac1O09106 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hdac1O09106 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Hdac1O09106 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.91□□□□□ -0.02
Hdac1O09106 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac1O09106 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Hdac1O09106 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Hdac1O09106 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.9□□□□□ -0.02
Hdac1O09106 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.9□□□□□ -0.02
Hdac1O09106 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Gm27243-201ENSMUST00000183964 521 ntBASIC14.9□□□□□ -0.02
Hdac1O09106 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.9□□□□□ -0.02
Hdac1O09106 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Gm19163-201ENSMUST00000223313 780 ntBASIC14.9□□□□□ -0.02
Hdac1O09106 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.9□□□□□ -0.02
Hdac1O09106 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.9□□□□□ -0.02
Hdac1O09106 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.9□□□□□ -0.02
Hdac1O09106 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac1O09106 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.9□□□□□ -0.02
Hdac1O09106 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Hdac1O09106 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Hdac1O09106 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac1O09106 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac1O09106 AC154639.1-201ENSMUST00000224393 2849 ntBASIC14.89□□□□□ -0.03
Hdac1O09106 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac1O09106 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.89□□□□□ -0.03
Hdac1O09106 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac1O09106 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.89□□□□□ -0.03
Hdac1O09106 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Hdac1O09106 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hdac1O09106 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac1O09106 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Hdac1O09106 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac1O09106 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Hdac1O09106 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms