Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Rmrp-201ENSMUST00000157463 271 ntBASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Gm26927-201ENSMUST00000182385 965 ntBASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfrsf11bO08712 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfrsf11bO08712 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Gm11964-201ENSMUST00000120982 444 ntBASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Gm10268-201ENSMUST00000085340 555 ntBASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfrsf11bO08712 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms