Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Gm22331-201ENSMUST00000158066 136 ntBASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Gm4271-201ENSMUST00000174444 973 ntBASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Gm38092-201ENSMUST00000195600 653 ntBASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Gm24526-201ENSMUST00000082921 158 ntBASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh9F8VPK8 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Gm24644-201ENSMUST00000157114 139 ntBASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Gm29705-201ENSMUST00000212598 474 ntBASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh9F8VPK8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Rmrp-201ENSMUST00000157463 271 ntBASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdh9F8VPK8 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms