Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Gm14704-201ENSMUST00000120300 874 ntBASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Mir6392-201ENSMUST00000184924 108 ntBASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdh1F7BJK1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Gm2495-201ENSMUST00000191160 466 ntBASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Gm18624-201ENSMUST00000220966 658 ntBASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh1F7BJK1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.29□□□□□ -0.6
Pcdh1F7BJK1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms