Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubb1A2AQ07 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Gm25261-201ENSMUST00000157416 134 ntBASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Rmrp-201ENSMUST00000157463 271 ntBASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Gm17150-201ENSMUST00000165577 381 ntBASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.84□□□□□ -0.35
Tubb1A2AQ07 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb1A2AQ07 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tubb1A2AQ07 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Tubb1A2AQ07 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tubb1A2AQ07 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tubb1A2AQ07 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tubb1A2AQ07 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Tubb1A2AQ07 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm12502-201ENSMUST00000120197 444 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm13315-201ENSMUST00000120376 991 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm27243-201ENSMUST00000183964 521 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm40466-201ENSMUST00000212174 422 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Tubb1A2AQ07 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb1A2AQ07 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb1A2AQ07 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb1A2AQ07 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb1A2AQ07 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb1A2AQ07 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.82□□□□□ -0.36
Tubb1A2AQ07 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb1A2AQ07 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb1A2AQ07 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb1A2AQ07 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Tubb1A2AQ07 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms