Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Mir339-201ENSMUST00000083659 96 ntBASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ClcnkaQ9WUB7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Gm12384-201ENSMUST00000119228 919 ntBASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Gm23363-201ENSMUST00000175024 79 ntBASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Gm27731-201ENSMUST00000185192 107 ntBASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ClcnkaQ9WUB7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Snord83b-201ENSMUST00000104546 94 ntBASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm14921-201ENSMUST00000118643 908 ntBASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm11425-201ENSMUST00000119608 498 ntBASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm45784-201ENSMUST00000188360 142 ntBASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm9396-201ENSMUST00000076703 567 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms