Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Gm15321-201ENSMUST00000121290 288 ntBASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Gm6152-201ENSMUST00000151704 340 ntBASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Gm7730-201ENSMUST00000212486 454 ntBASIC11.21□□□□□ -0.61
Thumpd1Q99J36 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.21□□□□□ -0.61
Thumpd1Q99J36 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Gm18473-201ENSMUST00000220543 868 ntBASIC11.21□□□□□ -0.61
Thumpd1Q99J36 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Thumpd1Q99J36 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Gm15703-201ENSMUST00000120250 880 ntBASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Gm23363-201ENSMUST00000175024 79 ntBASIC11.2□□□□□ -0.62
Thumpd1Q99J36 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Thumpd1Q99J36 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thumpd1Q99J36 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Thumpd1Q99J36 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thumpd1Q99J36 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.19□□□□□ -0.62
Thumpd1Q99J36 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thumpd1Q99J36 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thumpd1Q99J36 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thumpd1Q99J36 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thumpd1Q99J36 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thumpd1Q99J36 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Thumpd1Q99J36 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms