Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.35□□□□□ -0.27
Rd3Q8BRE0 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.35□□□□□ -0.27
Rd3Q8BRE0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rd3Q8BRE0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.34□□□□□ -0.27
Rd3Q8BRE0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rd3Q8BRE0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.33□□□□□ -0.27
Rd3Q8BRE0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rd3Q8BRE0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Rd3Q8BRE0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Rd3Q8BRE0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rd3Q8BRE0 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Gm23200-201ENSMUST00000104379 132 ntBASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rd3Q8BRE0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Gm9083-201ENSMUST00000120423 819 ntBASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Gm24749-201ENSMUST00000157838 343 ntBASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Gm25732-201ENSMUST00000175168 60 ntBASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rd3Q8BRE0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms