Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pif1Q80SX8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Pif1Q80SX8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.7□□□□□ -0.54
Pif1Q80SX8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.7□□□□□ -0.54
Pif1Q80SX8 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Gm13665-201ENSMUST00000120830 528 ntBASIC11.7□□□□□ -0.54
Pif1Q80SX8 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Gm38092-201ENSMUST00000195600 653 ntBASIC11.7□□□□□ -0.54
Pif1Q80SX8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.7□□□□□ -0.54
Pif1Q80SX8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.7□□□□□ -0.54
Pif1Q80SX8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.7□□□□□ -0.54
Pif1Q80SX8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pif1Q80SX8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm12058-201ENSMUST00000118614 437 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm14109-201ENSMUST00000118814 309 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 B9d1os-201ENSMUST00000137010 674 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm26361-201ENSMUST00000158868 186 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Mir5120-201ENSMUST00000175020 78 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Mir6979-201ENSMUST00000183927 56 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm44405-201ENSMUST00000198952 126 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.69□□□□□ -0.54
Pif1Q80SX8 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.69□□□□□ -0.54
Pif1Q80SX8 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms