Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm45550-201ENSMUST00000209380 946 ntBASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Gm37905-201ENSMUST00000195310 341 ntBASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd4Q6PDQ2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Gm5537-201ENSMUST00000091117 1252 ntBASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Gm13910-201ENSMUST00000121752 1428 ntBASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chd4Q6PDQ2 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Gm38117-201ENSMUST00000194653 939 ntBASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Gm45398-201ENSMUST00000210561 165 ntBASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 AC140293.1-201ENSMUST00000225626 1247 ntBASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Gm19287-201ENSMUST00000203190 358 ntBASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Gm6867-201ENSMUST00000219165 425 ntBASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd4Q6PDQ2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Gm22920-201ENSMUST00000102175 109 ntBASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Gm14460-201ENSMUST00000121511 639 ntBASIC16.1■□□□□ 0.17
Chd4Q6PDQ2 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms