Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.39□□□□□ -0.27
Syne3Q4FZC9 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.39□□□□□ -0.27
Syne3Q4FZC9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.38□□□□□ -0.27
Syne3Q4FZC9 AY702102-202ENSMUST00000194651 1173 ntBASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Syne3Q4FZC9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Gm7029-201ENSMUST00000173226 450 ntBASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Gm5370-201ENSMUST00000187187 574 ntBASIC13.37□□□□□ -0.27
Syne3Q4FZC9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.37□□□□□ -0.27
Syne3Q4FZC9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.37□□□□□ -0.27
Syne3Q4FZC9 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Syne3Q4FZC9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Gm12742-201ENSMUST00000117326 410 ntBASIC13.36□□□□□ -0.27
Syne3Q4FZC9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Gm8099-201ENSMUST00000200510 742 ntBASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Gm44124-201ENSMUST00000204159 472 ntBASIC13.36□□□□□ -0.27
Syne3Q4FZC9 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms