Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.63□□□□□ -0.23
CiitaP79621 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CiitaP79621 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.62□□□□□ -0.23
CiitaP79621 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
CiitaP79621 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.62□□□□□ -0.23
CiitaP79621 Gm13665-201ENSMUST00000120830 528 ntBASIC13.62□□□□□ -0.23
CiitaP79621 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.62□□□□□ -0.23
CiitaP79621 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.62□□□□□ -0.23
CiitaP79621 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.62□□□□□ -0.23
CiitaP79621 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.62□□□□□ -0.23
CiitaP79621 Gm29199-201ENSMUST00000187766 775 ntBASIC13.62□□□□□ -0.23
CiitaP79621 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.62□□□□□ -0.23
CiitaP79621 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.62□□□□□ -0.23
CiitaP79621 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.62□□□□□ -0.23
CiitaP79621 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CiitaP79621 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CiitaP79621 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CiitaP79621 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CiitaP79621 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CiitaP79621 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.61□□□□□ -0.23
CiitaP79621 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.61□□□□□ -0.23
CiitaP79621 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.61□□□□□ -0.23
CiitaP79621 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.61□□□□□ -0.23
CiitaP79621 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.61□□□□□ -0.23
CiitaP79621 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.61□□□□□ -0.23
CiitaP79621 Gm10312-201ENSMUST00000078515 489 ntBASIC13.61□□□□□ -0.23
CiitaP79621 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.61□□□□□ -0.23
CiitaP79621 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CiitaP79621 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CiitaP79621 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CiitaP79621 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CiitaP79621 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.6□□□□□ -0.23
CiitaP79621 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CiitaP79621 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CiitaP79621 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CiitaP79621 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms