Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.53□□□□□ -0.4
Atxn1P54254 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.53□□□□□ -0.4
Atxn1P54254 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Atxn1P54254 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Atxn1P54254 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.53□□□□□ -0.4
Atxn1P54254 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.53□□□□□ -0.4
Atxn1P54254 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Atxn1P54254 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.53□□□□□ -0.4
Atxn1P54254 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Atxn1P54254 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atxn1P54254 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atxn1P54254 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.52□□□□□ -0.4
Atxn1P54254 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atxn1P54254 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atxn1P54254 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atxn1P54254 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.52□□□□□ -0.4
Atxn1P54254 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.52□□□□□ -0.4
Atxn1P54254 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Atxn1P54254 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Atxn1P54254 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Atxn1P54254 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.4
Atxn1P54254 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Atxn1P54254 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Atxn1P54254 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Atxn1P54254 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.52□□□□□ -0.41
Atxn1P54254 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.52□□□□□ -0.41
Atxn1P54254 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.52□□□□□ -0.41
Atxn1P54254 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.52□□□□□ -0.41
Atxn1P54254 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.52□□□□□ -0.41
Atxn1P54254 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.52□□□□□ -0.41
Atxn1P54254 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.52□□□□□ -0.41
Atxn1P54254 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.52□□□□□ -0.41
Atxn1P54254 Gm4607-201ENSMUST00000206649 577 ntBASIC12.52□□□□□ -0.41
Atxn1P54254 Gm18730-201ENSMUST00000218038 343 ntBASIC12.52□□□□□ -0.41
Atxn1P54254 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.52□□□□□ -0.41
Atxn1P54254 Ntng1-201ENSMUST00000051253 327 ntBASIC12.52□□□□□ -0.41
Atxn1P54254 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Gm10179-201ENSMUST00000086233 688 ntBASIC12.52□□□□□ -0.41
Atxn1P54254 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.52□□□□□ -0.41
Atxn1P54254 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.52□□□□□ -0.41
Atxn1P54254 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Atxn1P54254 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Atxn1P54254 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.52□□□□□ -0.41
Atxn1P54254 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Atxn1P54254 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Atxn1P54254 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Atxn1P54254 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Atxn1P54254 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.51□□□□□ -0.41
Atxn1P54254 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Atxn1P54254 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.51□□□□□ -0.41
Atxn1P54254 Gm18734-201ENSMUST00000172937 808 ntBASIC12.51□□□□□ -0.41
Atxn1P54254 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.51□□□□□ -0.41
Atxn1P54254 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.51□□□□□ -0.41
Atxn1P54254 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.51□□□□□ -0.41
Atxn1P54254 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Atxn1P54254 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.51□□□□□ -0.41
Atxn1P54254 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Atxn1P54254 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms