Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.2□□□□□ -0.46
Sox18P43680 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox18P43680 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Gm24541-201ENSMUST00000103871 96 ntBASIC12.2□□□□□ -0.46
Sox18P43680 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Sox18P43680 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.2□□□□□ -0.46
Sox18P43680 Gm13492-201ENSMUST00000119772 665 ntBASIC12.2□□□□□ -0.46
Sox18P43680 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.2□□□□□ -0.46
Sox18P43680 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.2□□□□□ -0.46
Sox18P43680 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.2□□□□□ -0.46
Sox18P43680 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox18P43680 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox18P43680 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Gm44845-201ENSMUST00000208773 335 ntBASIC12.2□□□□□ -0.46
Sox18P43680 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.2□□□□□ -0.46
Sox18P43680 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox18P43680 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.2□□□□□ -0.46
Sox18P43680 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.2□□□□□ -0.46
Sox18P43680 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sox18P43680 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sox18P43680 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sox18P43680 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sox18P43680 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sox18P43680 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.19□□□□□ -0.46
Sox18P43680 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sox18P43680 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sox18P43680 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.19□□□□□ -0.46
Sox18P43680 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox18P43680 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sox18P43680 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.19□□□□□ -0.46
Sox18P43680 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.19□□□□□ -0.46
Sox18P43680 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox18P43680 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sox18P43680 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox18P43680 Gm15432-201ENSMUST00000121106 195 ntBASIC12.19□□□□□ -0.46
Sox18P43680 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox18P43680 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.19□□□□□ -0.46
Sox18P43680 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.19□□□□□ -0.46
Sox18P43680 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.19□□□□□ -0.46
Sox18P43680 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.19□□□□□ -0.46
Sox18P43680 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.19□□□□□ -0.46
Sox18P43680 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.19□□□□□ -0.46
Sox18P43680 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.19□□□□□ -0.46
Sox18P43680 Gm17812-201ENSMUST00000204935 318 ntBASIC12.19□□□□□ -0.46
Sox18P43680 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox18P43680 Gzmn-202ENSMUST00000225535 989 ntBASIC12.19□□□□□ -0.46
Sox18P43680 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.19□□□□□ -0.46
Sox18P43680 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Gm22058-201ENSMUST00000083393 310 ntBASIC12.19□□□□□ -0.46
Sox18P43680 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox18P43680 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.19□□□□□ -0.46
Sox18P43680 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Daam2-202ENSMUST00000224595 1926 ntBASIC12.19□□□□□ -0.46
Sox18P43680 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox18P43680 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox18P43680 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms