Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rc3h2P0C090 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h2P0C090 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.85□□□□□ -0.35
Rc3h2P0C090 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.85□□□□□ -0.35
Rc3h2P0C090 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.85□□□□□ -0.35
Rc3h2P0C090 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.85□□□□□ -0.35
Rc3h2P0C090 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h2P0C090 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.85□□□□□ -0.35
Rc3h2P0C090 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.84□□□□□ -0.35
Rc3h2P0C090 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rc3h2P0C090 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.84□□□□□ -0.35
Rc3h2P0C090 Gm15703-201ENSMUST00000120250 880 ntBASIC12.84□□□□□ -0.35
Rc3h2P0C090 Gm13315-201ENSMUST00000120376 991 ntBASIC12.84□□□□□ -0.35
Rc3h2P0C090 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.84□□□□□ -0.35
Rc3h2P0C090 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Gm26361-201ENSMUST00000158868 186 ntBASIC12.84□□□□□ -0.35
Rc3h2P0C090 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Gm2260-201ENSMUST00000184965 657 ntBASIC12.84□□□□□ -0.35
Rc3h2P0C090 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.84□□□□□ -0.35
Rc3h2P0C090 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.84□□□□□ -0.35
Rc3h2P0C090 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.84□□□□□ -0.35
Rc3h2P0C090 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.84□□□□□ -0.35
Rc3h2P0C090 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rc3h2P0C090 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rc3h2P0C090 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
Rc3h2P0C090 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rc3h2P0C090 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rc3h2P0C090 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Rc3h2P0C090 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.83□□□□□ -0.36
Rc3h2P0C090 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h2P0C090 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rc3h2P0C090 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms