Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.65□□□□□ -0.38
Hoxb3P09026 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hoxb3P09026 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxb3P09026 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxb3P09026 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxb3P09026 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hoxb3P09026 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxb3P09026 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm10434-201ENSMUST00000101158 471 ntBASIC12.64□□□□□ -0.39
Hoxb3P09026 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm13286-201ENSMUST00000117750 537 ntBASIC12.64□□□□□ -0.39
Hoxb3P09026 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm44607-201ENSMUST00000205611 1090 ntBASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm14005-208ENSMUST00000223654 681 ntBASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm25201-201ENSMUST00000083093 170 ntBASIC12.64□□□□□ -0.39
Hoxb3P09026 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hoxb3P09026 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.64□□□□□ -0.39
Hoxb3P09026 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.64□□□□□ -0.39
Hoxb3P09026 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb3P09026 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.63□□□□□ -0.39
Hoxb3P09026 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Gm10051-201ENSMUST00000145209 414 ntBASIC12.63□□□□□ -0.39
Hoxb3P09026 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Gm8581-201ENSMUST00000188636 890 ntBASIC12.63□□□□□ -0.39
Hoxb3P09026 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Gm5340-201ENSMUST00000203733 880 ntBASIC12.63□□□□□ -0.39
Hoxb3P09026 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 AC162940.1-201ENSMUST00000224745 1167 ntBASIC12.63□□□□□ -0.39
Hoxb3P09026 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb3P09026 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb3P09026 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms