Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Igh-VJ558P01758 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Gm12314-201ENSMUST00000118104 538 ntBASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Gm13736-201ENSMUST00000119272 253 ntBASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Gm5745-201ENSMUST00000183748 313 ntBASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Gm5904-201ENSMUST00000210286 865 ntBASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Gm45925-201ENSMUST00000218882 744 ntBASIC10.86□□□□□ -0.67
Igh-VJ558P01758 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.86□□□□□ -0.67
Igh-VJ558P01758 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Matn2-203ENSMUST00000226766 3252 ntBASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Gm13829-201ENSMUST00000119600 138 ntBASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Gm27514-201ENSMUST00000183692 110 ntBASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igh-VJ558P01758 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms