Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Gm22189-201ENSMUST00000103822 86 ntBASIC11.62□□□□□ -0.55
Cops4O88544 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.62□□□□□ -0.55
Cops4O88544 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Cops4O88544 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.62□□□□□ -0.55
Cops4O88544 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cops4O88544 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Gm42612-201ENSMUST00000197986 623 ntBASIC11.62□□□□□ -0.55
Cops4O88544 Gm43170-201ENSMUST00000199827 612 ntBASIC11.62□□□□□ -0.55
Cops4O88544 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.62□□□□□ -0.55
Cops4O88544 Gm7730-201ENSMUST00000212486 454 ntBASIC11.62□□□□□ -0.55
Cops4O88544 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.62□□□□□ -0.55
Cops4O88544 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.62□□□□□ -0.55
Cops4O88544 Gm19220-201ENSMUST00000222682 803 ntBASIC11.62□□□□□ -0.55
Cops4O88544 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.62□□□□□ -0.55
Cops4O88544 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.62□□□□□ -0.55
Cops4O88544 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cops4O88544 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Cops4O88544 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cops4O88544 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cops4O88544 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.61□□□□□ -0.55
Cops4O88544 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.61□□□□□ -0.55
Cops4O88544 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.61□□□□□ -0.55
Cops4O88544 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.61□□□□□ -0.55
Cops4O88544 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cops4O88544 Gm13813-201ENSMUST00000120998 787 ntBASIC11.61□□□□□ -0.55
Cops4O88544 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.61□□□□□ -0.55
Cops4O88544 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cops4O88544 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.61□□□□□ -0.55
Cops4O88544 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.61□□□□□ -0.55
Cops4O88544 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.61□□□□□ -0.55
Cops4O88544 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.61□□□□□ -0.55
Cops4O88544 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cops4O88544 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.61□□□□□ -0.55
Cops4O88544 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cops4O88544 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cops4O88544 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Cops4O88544 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cops4O88544 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.6□□□□□ -0.55
Cops4O88544 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.6□□□□□ -0.55
Cops4O88544 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.6□□□□□ -0.55
Cops4O88544 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Cops4O88544 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cops4O88544 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms