Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col6a3E9PWQ3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Cacna2d3-208ENSMUST00000225985 918 ntBASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Gm10263-201ENSMUST00000085163 300 ntBASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Gm14921-201ENSMUST00000118643 908 ntBASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.2□□□□□ -0.46
Col6a3E9PWQ3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm25569-201ENSMUST00000157175 131 ntBASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm12774-201ENSMUST00000117881 416 ntBASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Krtap6-3-201ENSMUST00000079151 444 ntBASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm11511-201ENSMUST00000118146 540 ntBASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm20493-201ENSMUST00000173706 213 ntBASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col6a3E9PWQ3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Mir598-201ENSMUST00000102094 79 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm14639-201ENSMUST00000120850 866 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm37981-201ENSMUST00000194280 535 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm31763-201ENSMUST00000217788 673 ntTSL 3 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms