Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Gm6244-201ENSMUST00000178732 841 ntBASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Gm27331-201ENSMUST00000183705 60 ntBASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc112A0AUP1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Gm12384-201ENSMUST00000119228 919 ntBASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Mir1894-201ENSMUST00000122802 81 ntBASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Gm7063-201ENSMUST00000186840 981 ntBASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Gm4768-201ENSMUST00000206199 686 ntBASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Gm32025-201ENSMUST00000217960 307 ntBASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc112A0AUP1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Gm24231-201ENSMUST00000104315 133 ntBASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc112A0AUP1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms