Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Gm9135-201ENSMUST00000182963 990 ntBASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Gm37852-201ENSMUST00000193027 350 ntBASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Gm7082-201ENSMUST00000209880 969 ntBASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Olfr584-201ENSMUST00000098210 964 ntBASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col4a4Q9QZR9 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gm5700-201ENSMUST00000191483 989 ntBASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gm7719-201ENSMUST00000182374 975 ntBASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Gm42511-201ENSMUST00000196160 234 ntBASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col4a4Q9QZR9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gm12906-201ENSMUST00000154610 441 ntBASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gm22146-201ENSMUST00000157397 288 ntBASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gm43854-201ENSMUST00000200418 394 ntBASIC12.28□□□□□ -0.44
Col4a4Q9QZR9 Gm7504-201ENSMUST00000201449 424 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms