Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Gm18054-201ENSMUST00000207539 555 ntBASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Gm5904-201ENSMUST00000210286 865 ntBASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp2aQ9DB34 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp2aQ9DB34 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.15□□□□□ -0.31
Chmp2aQ9DB34 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Gm38092-201ENSMUST00000195600 653 ntBASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Gm10608-202ENSMUST00000213924 676 ntBASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Gm5781-201ENSMUST00000219792 443 ntBASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Gm9899-201ENSMUST00000065519 555 ntBASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chmp2aQ9DB34 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2aQ9DB34 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp2aQ9DB34 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.13□□□□□ -0.31
Chmp2aQ9DB34 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms