Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.76□□□□□ -0.05
Rufy3Q9D394 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Gm12390-201ENSMUST00000117897 397 ntBASIC14.76□□□□□ -0.05
Rufy3Q9D394 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Gm19184-201ENSMUST00000196798 928 ntBASIC14.76□□□□□ -0.05
Rufy3Q9D394 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rufy3Q9D394 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.75□□□□□ -0.05
Rufy3Q9D394 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.75□□□□□ -0.05
Rufy3Q9D394 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 CT025624.1-201ENSMUST00000224007 2700 ntBASIC14.75□□□□□ -0.05
Rufy3Q9D394 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.75□□□□□ -0.05
Rufy3Q9D394 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rufy3Q9D394 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Gm43365-201ENSMUST00000196522 2106 ntBASIC14.74□□□□□ -0.05
Rufy3Q9D394 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.74□□□□□ -0.05
Rufy3Q9D394 Gm12384-201ENSMUST00000119228 919 ntBASIC14.74□□□□□ -0.05
Rufy3Q9D394 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Gm6222-202ENSMUST00000182143 629 ntBASIC14.74□□□□□ -0.05
Rufy3Q9D394 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.74□□□□□ -0.05
Rufy3Q9D394 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.74□□□□□ -0.05
Rufy3Q9D394 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rufy3Q9D394 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rufy3Q9D394 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Rufy3Q9D394 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Rufy3Q9D394 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rufy3Q9D394 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.73□□□□□ -0.05
Rufy3Q9D394 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rufy3Q9D394 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms