Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Gm13223-201ENSMUST00000118609 747 ntBASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Gm9797-201ENSMUST00000052902 613 ntBASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Krt88Q9CPR6 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Krt88Q9CPR6 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Krt88Q9CPR6 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms