Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Gm9996-201ENSMUST00000070359 913 ntBASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac2Q91Y09 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Gm9062-201ENSMUST00000117712 727 ntBASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Gm11450-201ENSMUST00000121144 333 ntBASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Gm9230-201ENSMUST00000188228 532 ntBASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Gm5051-201ENSMUST00000204085 485 ntBASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhac2Q91Y09 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm12616-201ENSMUST00000118594 382 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm12624-201ENSMUST00000177615 382 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm12621-201ENSMUST00000177760 382 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm12615-201ENSMUST00000177970 382 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm12622-201ENSMUST00000177975 382 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm12627-201ENSMUST00000178412 382 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm12625-201ENSMUST00000179122 382 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm12614-201ENSMUST00000179586 382 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm12613-201ENSMUST00000180323 382 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Gm28071-201ENSMUST00000190355 478 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 AC159819.2-201ENSMUST00000216151 342 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Ntng1-201ENSMUST00000051253 327 ntBASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhac2Q91Y09 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms