Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Snora78-201ENSMUST00000158630 128 ntBASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Gm9022-201ENSMUST00000182482 992 ntBASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Gm24136-201ENSMUST00000083374 165 ntBASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdhb6Q91XZ4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Gm22018-201ENSMUST00000104357 131 ntBASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Gm27243-201ENSMUST00000183964 521 ntBASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Gm44405-201ENSMUST00000198952 126 ntBASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Pcdhb6Q91XZ4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdhb6Q91XZ4 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms