Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sh3rf2Q8BZT2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gm11439-201ENSMUST00000118598 409 ntBASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gm14277-201ENSMUST00000121195 360 ntBASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Mir5132-201ENSMUST00000175166 71 ntBASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gzmn-202ENSMUST00000225535 989 ntBASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sh3rf2Q8BZT2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Sh3rf2Q8BZT2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Sh3rf2Q8BZT2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms