Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Gm36970-201ENSMUST00000193688 1859 ntBASIC22.16■■□□□ 1.14
Rtl1Q7M732 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Gm5455-201ENSMUST00000058710 715 ntBASIC22.16■■□□□ 1.14
Rtl1Q7M732 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtl1Q7M732 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Rtl1Q7M732 AC157950.1-201ENSMUST00000217561 2168 ntBASIC22.15■■□□□ 1.14
Rtl1Q7M732 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC22.15■■□□□ 1.14
Rtl1Q7M732 Gm12196-201ENSMUST00000120954 262 ntBASIC22.15■■□□□ 1.14
Rtl1Q7M732 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtl1Q7M732 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Rtl1Q7M732 B9d1os-201ENSMUST00000137010 674 ntBASIC22.14■■□□□ 1.14
Rtl1Q7M732 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.14
Rtl1Q7M732 Gm43947-201ENSMUST00000203019 959 ntBASIC22.14■■□□□ 1.14
Rtl1Q7M732 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC22.14■■□□□ 1.13
Rtl1Q7M732 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rtl1Q7M732 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Gm43138-201ENSMUST00000199123 708 ntBASIC22.14■■□□□ 1.13
Rtl1Q7M732 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtl1Q7M732 Ntrk2-204ENSMUST00000224259 3049 ntBASIC22.13■■□□□ 1.13
Rtl1Q7M732 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Gm7003-201ENSMUST00000195089 312 ntBASIC22.13■■□□□ 1.13
Rtl1Q7M732 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtl1Q7M732 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Rtl1Q7M732 AC126257.1-201ENSMUST00000213195 1536 ntBASIC22.12■■□□□ 1.13
Rtl1Q7M732 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Gm7207-201ENSMUST00000211575 1067 ntBASIC22.12■■□□□ 1.13
Rtl1Q7M732 Nsd1-205ENSMUST00000224693 852 ntBASIC22.12■■□□□ 1.13
Rtl1Q7M732 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl1Q7M732 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl1Q7M732 AC126262.1-201ENSMUST00000221802 1904 ntBASIC22.12■■□□□ 1.13
Rtl1Q7M732 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtl1Q7M732 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rtl1Q7M732 Gm13045-201ENSMUST00000119019 712 ntBASIC22.11■■□□□ 1.13
Rtl1Q7M732 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms