Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC9.72□□□□□ -0.85
Notch3Q61982 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.72□□□□□ -0.85
Notch3Q61982 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Notch3Q61982 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.72□□□□□ -0.85
Notch3Q61982 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Notch3Q61982 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.72□□□□□ -0.85
Notch3Q61982 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.71□□□□□ -0.85
Notch3Q61982 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Notch3Q61982 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Notch3Q61982 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.71□□□□□ -0.85
Notch3Q61982 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC9.71□□□□□ -0.85
Notch3Q61982 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.71□□□□□ -0.85
Notch3Q61982 Gm18584-201ENSMUST00000203098 964 ntBASIC9.71□□□□□ -0.85
Notch3Q61982 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.71□□□□□ -0.85
Notch3Q61982 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.71□□□□□ -0.85
Notch3Q61982 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC9.71□□□□□ -0.85
Notch3Q61982 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 CT030684.3-201ENSMUST00000227308 2445 ntBASIC9.71□□□□□ -0.85
Notch3Q61982 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Notch3Q61982 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Notch3Q61982 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Gm14028-201ENSMUST00000117434 479 ntBASIC9.71□□□□□ -0.86
Notch3Q61982 Gm12217-201ENSMUST00000118858 696 ntBASIC9.71□□□□□ -0.86
Notch3Q61982 Gm12502-201ENSMUST00000120197 444 ntBASIC9.71□□□□□ -0.86
Notch3Q61982 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC9.71□□□□□ -0.86
Notch3Q61982 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Notch3Q61982 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.71□□□□□ -0.86
Notch3Q61982 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Notch3Q61982 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Notch3Q61982 Gm44967-201ENSMUST00000207047 631 ntBASIC9.71□□□□□ -0.86
Notch3Q61982 Gm13097-201ENSMUST00000210722 397 ntBASIC9.71□□□□□ -0.86
Notch3Q61982 Gm32025-201ENSMUST00000217960 307 ntBASIC9.71□□□□□ -0.86
Notch3Q61982 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
Notch3Q61982 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Ntrk2-209ENSMUST00000225950 2640 ntBASIC9.71□□□□□ -0.86
Notch3Q61982 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Notch3Q61982 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.7□□□□□ -0.86
Notch3Q61982 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Notch3Q61982 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Notch3Q61982 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC9.7□□□□□ -0.86
Notch3Q61982 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.7□□□□□ -0.86
Notch3Q61982 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Notch3Q61982 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.7□□□□□ -0.86
Notch3Q61982 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.7□□□□□ -0.86
Notch3Q61982 Gm26185-201ENSMUST00000157692 266 ntBASIC9.7□□□□□ -0.86
Notch3Q61982 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Notch3Q61982 Gm3508-201ENSMUST00000186012 792 ntBASIC9.7□□□□□ -0.86
Notch3Q61982 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC9.7□□□□□ -0.86
Notch3Q61982 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms