Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col11a1Q61245 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.81□□□□□ -0.2
Col11a1Q61245 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.81□□□□□ -0.2
Col11a1Q61245 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Col11a1Q61245 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.81□□□□□ -0.2
Col11a1Q61245 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col11a1Q61245 Gm26035-201ENSMUST00000083065 308 ntBASIC13.81□□□□□ -0.2
Col11a1Q61245 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Col11a1Q61245 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Col11a1Q61245 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Col11a1Q61245 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.81□□□□□ -0.2
Col11a1Q61245 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Col11a1Q61245 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.8□□□□□ -0.2
Col11a1Q61245 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.8□□□□□ -0.2
Col11a1Q61245 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col11a1Q61245 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.8□□□□□ -0.2
Col11a1Q61245 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.8□□□□□ -0.2
Col11a1Q61245 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Col11a1Q61245 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col11a1Q61245 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col11a1Q61245 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.8□□□□□ -0.2
Col11a1Q61245 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col11a1Q61245 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.8□□□□□ -0.2
Col11a1Q61245 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.8□□□□□ -0.2
Col11a1Q61245 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.8□□□□□ -0.2
Col11a1Q61245 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.8□□□□□ -0.2
Col11a1Q61245 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Col11a1Q61245 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.8□□□□□ -0.2
Col11a1Q61245 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.8□□□□□ -0.2
Col11a1Q61245 Gm5451-201ENSMUST00000080545 579 ntBASIC13.8□□□□□ -0.2
Col11a1Q61245 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Col11a1Q61245 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Col11a1Q61245 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.79□□□□□ -0.2
Col11a1Q61245 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.79□□□□□ -0.2
Col11a1Q61245 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.79□□□□□ -0.2
Col11a1Q61245 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.79□□□□□ -0.2
Col11a1Q61245 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Col11a1Q61245 Mir671-201ENSMUST00000102432 98 ntBASIC13.79□□□□□ -0.2
Col11a1Q61245 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.79□□□□□ -0.2
Col11a1Q61245 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.79□□□□□ -0.2
Col11a1Q61245 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.79□□□□□ -0.2
Col11a1Q61245 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Col11a1Q61245 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.79□□□□□ -0.2
Col11a1Q61245 Gm2553-201ENSMUST00000215986 605 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms