Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 CT009713.8-201ENSMUST00000225448 560 ntBASIC16.91■□□□□ 0.3
Nphp4P59240 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nphp4P59240 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nphp4P59240 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Nphp4P59240 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.9■□□□□ 0.3
Nphp4P59240 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nphp4P59240 Gm14263-201ENSMUST00000117955 746 ntBASIC16.9■□□□□ 0.3
Nphp4P59240 Gm12501-201ENSMUST00000119163 529 ntBASIC16.9■□□□□ 0.3
Nphp4P59240 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.9■□□□□ 0.3
Nphp4P59240 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Nphp4P59240 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC16.9■□□□□ 0.3
Nphp4P59240 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nphp4P59240 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC16.9■□□□□ 0.3
Nphp4P59240 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Gm9072-201ENSMUST00000218390 1514 ntBASIC16.9■□□□□ 0.3
Nphp4P59240 Gm5847-201ENSMUST00000178959 1595 ntBASIC16.9■□□□□ 0.3
Nphp4P59240 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nphp4P59240 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nphp4P59240 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nphp4P59240 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.89■□□□□ 0.29
Nphp4P59240 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Gm22334-201ENSMUST00000158070 133 ntBASIC16.89■□□□□ 0.29
Nphp4P59240 Gm3332-201ENSMUST00000189337 928 ntBASIC16.89■□□□□ 0.29
Nphp4P59240 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Gm6580-201ENSMUST00000117504 1357 ntBASIC16.89■□□□□ 0.29
Nphp4P59240 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nphp4P59240 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 AC160405.1-201ENSMUST00000218207 1545 ntBASIC16.89■□□□□ 0.29
Nphp4P59240 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nphp4P59240 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nphp4P59240 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nphp4P59240 Gm23912-201ENSMUST00000104687 87 ntBASIC16.88■□□□□ 0.29
Nphp4P59240 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.88■□□□□ 0.29
Nphp4P59240 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Gm25881-201ENSMUST00000157783 103 ntBASIC16.88■□□□□ 0.29
Nphp4P59240 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Gm5523-201ENSMUST00000180415 997 ntBASIC16.88■□□□□ 0.29
Nphp4P59240 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC16.88■□□□□ 0.29
Nphp4P59240 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC16.88■□□□□ 0.29
Nphp4P59240 Gm4034-201ENSMUST00000187674 480 ntBASIC16.88■□□□□ 0.29
Nphp4P59240 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Gm4157-201ENSMUST00000211647 679 ntBASIC16.88■□□□□ 0.29
Nphp4P59240 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.88■□□□□ 0.29
Nphp4P59240 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nphp4P59240 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nphp4P59240 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms