Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
RxrbP28704 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RxrbP28704 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.66□□□□□ -0.38
RxrbP28704 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.66□□□□□ -0.38
RxrbP28704 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RxrbP28704 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RxrbP28704 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.65□□□□□ -0.38
RxrbP28704 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Gm5687-201ENSMUST00000118252 640 ntBASIC12.65□□□□□ -0.38
RxrbP28704 Gm12341-201ENSMUST00000119724 503 ntBASIC12.65□□□□□ -0.38
RxrbP28704 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
RxrbP28704 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.65□□□□□ -0.38
RxrbP28704 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.65□□□□□ -0.38
RxrbP28704 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.65□□□□□ -0.38
RxrbP28704 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.65□□□□□ -0.38
RxrbP28704 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.65□□□□□ -0.38
RxrbP28704 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.65□□□□□ -0.38
RxrbP28704 Mir339-201ENSMUST00000083659 96 ntBASIC12.65□□□□□ -0.38
RxrbP28704 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.65□□□□□ -0.38
RxrbP28704 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.65□□□□□ -0.38
RxrbP28704 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RxrbP28704 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RxrbP28704 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
RxrbP28704 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RxrbP28704 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 Gm14921-201ENSMUST00000118643 908 ntBASIC12.64□□□□□ -0.39
RxrbP28704 Gm12384-201ENSMUST00000119228 919 ntBASIC12.64□□□□□ -0.39
RxrbP28704 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.64□□□□□ -0.39
RxrbP28704 Mir7654-201ENSMUST00000185082 70 ntBASIC12.64□□□□□ -0.39
RxrbP28704 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Itm2b-204ENSMUST00000228637 783 ntBASIC12.64□□□□□ -0.39
RxrbP28704 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
RxrbP28704 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RxrbP28704 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.64□□□□□ -0.39
RxrbP28704 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
RxrbP28704 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RxrbP28704 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RxrbP28704 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RxrbP28704 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.63□□□□□ -0.39
RxrbP28704 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RxrbP28704 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms