Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
XPAP23025 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
XPAP23025 AL365209.1-201ENST00000624418 6473 ntBASIC15.84■□□□□ 0.13
XPAP23025 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
XPAP23025 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 AC074338.1-201ENST00000416825 156 ntBASIC15.84■□□□□ 0.13
XPAP23025 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.84■□□□□ 0.13
XPAP23025 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 AC123567.1-201ENST00000548294 1261 ntBASIC15.84■□□□□ 0.13
XPAP23025 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
XPAP23025 RRP7BP-205ENST00000566851 833 ntBASIC15.84■□□□□ 0.13
XPAP23025 AC097359.3-201ENST00000603982 1210 ntBASIC15.84■□□□□ 0.13
XPAP23025 AC008494.3-201ENST00000606615 944 ntBASIC15.84■□□□□ 0.13
XPAP23025 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 AC025048.6-201ENST00000634326 1161 ntBASIC15.84■□□□□ 0.13
XPAP23025 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 AC112504.1-201ENST00000623415 1841 ntBASIC15.84■□□□□ 0.13
XPAP23025 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.84■□□□□ 0.13
XPAP23025 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.84■□□□□ 0.13
XPAP23025 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
XPAP23025 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 DOC2GP-204ENST00000639052 2548 ntBASIC15.84■□□□□ 0.13
XPAP23025 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.84■□□□□ 0.13
XPAP23025 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.13
XPAP23025 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
XPAP23025 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
XPAP23025 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
XPAP23025 AC010491.1-201ENST00000563101 2797 ntBASIC15.83■□□□□ 0.13
XPAP23025 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
XPAP23025 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.83■□□□□ 0.12
XPAP23025 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
XPAP23025 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.83■□□□□ 0.12
XPAP23025 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.83■□□□□ 0.12
XPAP23025 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.83■□□□□ 0.12
XPAP23025 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.83■□□□□ 0.12
XPAP23025 MYCLP2-201ENST00000449268 967 ntBASIC15.83■□□□□ 0.12
XPAP23025 RN7SL692P-201ENST00000464677 288 ntBASIC15.83■□□□□ 0.12
XPAP23025 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.83■□□□□ 0.12
XPAP23025 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
XPAP23025 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.83■□□□□ 0.12
XPAP23025 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.83■□□□□ 0.12
XPAP23025 AC093726.1-201ENST00000608064 963 ntBASIC15.83■□□□□ 0.12
XPAP23025 AC099568.2-201ENST00000609194 695 ntBASIC15.83■□□□□ 0.12
XPAP23025 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.83■□□□□ 0.12
XPAP23025 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.83■□□□□ 0.12
XPAP23025 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.83■□□□□ 0.12
XPAP23025 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.83■□□□□ 0.12
XPAP23025 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
XPAP23025 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
XPAP23025 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
XPAP23025 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.83■□□□□ 0.12
XPAP23025 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.83■□□□□ 0.12
XPAP23025 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
XPAP23025 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.82■□□□□ 0.12
XPAP23025 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.82■□□□□ 0.12
XPAP23025 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
XPAP23025 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms