Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXC6P09630 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HOXC6P09630 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC6P09630 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
HOXC6P09630 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HOXC6P09630 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXC6P09630 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 TPM3P8-201ENST00000330554 643 ntBASIC17.54■□□□□ 0.4
HOXC6P09630 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 AL662890.1-201ENST00000396818 632 ntBASIC17.54■□□□□ 0.4
HOXC6P09630 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.54■□□□□ 0.4
HOXC6P09630 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.54■□□□□ 0.4
HOXC6P09630 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC6P09630 HIST2H2BC-201ENST00000498492 580 ntBASIC17.54■□□□□ 0.4
HOXC6P09630 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC6P09630 AC015967.2-201ENST00000624092 234 ntBASIC17.54■□□□□ 0.4
HOXC6P09630 AC006435.4-201ENST00000625037 234 ntBASIC17.54■□□□□ 0.4
HOXC6P09630 AL356737.1-201ENST00000634391 234 ntBASIC17.54■□□□□ 0.4
HOXC6P09630 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXC6P09630 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HOXC6P09630 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
HOXC6P09630 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC6P09630 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC6P09630 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HOXC6P09630 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXC6P09630 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXC6P09630 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HOXC6P09630 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HOXC6P09630 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 AC148477.4-201ENST00000613430 1793 ntBASIC17.53■□□□□ 0.4
HOXC6P09630 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HOXC6P09630 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HOXC6P09630 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HOXC6P09630 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HOXC6P09630 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC6P09630 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXC6P09630 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXC6P09630 AC126915.1-201ENST00000522847 1038 ntBASIC17.53■□□□□ 0.4
HOXC6P09630 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC6P09630 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC6P09630 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.53■□□□□ 0.4
HOXC6P09630 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXC6P09630 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HOXC6P09630 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXC6P09630 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HOXC6P09630 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXC6P09630 AL023775.1-201ENST00000454907 1746 ntBASIC17.52■□□□□ 0.4
HOXC6P09630 AL354989.2-201ENST00000435838 1540 ntBASIC17.52■□□□□ 0.4
HOXC6P09630 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC6P09630 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC6P09630 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC6P09630 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC6P09630 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC6P09630 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXC6P09630 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC6P09630 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.52■□□□□ 0.4
HOXC6P09630 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.52■□□□□ 0.4
HOXC6P09630 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
HOXC6P09630 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC6P09630 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC6P09630 AC105129.2-201ENST00000559536 390 ntBASIC17.52■□□□□ 0.4
HOXC6P09630 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC6P09630 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXC6P09630 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXC6P09630 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.52■□□□□ 0.4
HOXC6P09630 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXC6P09630 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.52■□□□□ 0.4
HOXC6P09630 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
HOXC6P09630 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXC6P09630 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.52■□□□□ 0.39
HOXC6P09630 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC6P09630 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.52■□□□□ 0.39
HOXC6P09630 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC6P09630 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.52■□□□□ 0.39
HOXC6P09630 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HOXC6P09630 AL596087.1-201ENST00000400979 1969 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms