Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.22□□□□□ -0.61
Col5a1O88207 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.22□□□□□ -0.61
Col5a1O88207 Gm44980-201ENSMUST00000205826 314 ntBASIC11.22□□□□□ -0.61
Col5a1O88207 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.22□□□□□ -0.61
Col5a1O88207 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.22□□□□□ -0.61
Col5a1O88207 Gm9111-201ENSMUST00000219394 709 ntBASIC11.22□□□□□ -0.61
Col5a1O88207 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Gm5455-201ENSMUST00000058710 715 ntBASIC11.22□□□□□ -0.61
Col5a1O88207 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.22□□□□□ -0.61
Col5a1O88207 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.22□□□□□ -0.61
Col5a1O88207 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Col5a1O88207 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Col5a1O88207 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Gm14644-201ENSMUST00000116671 647 ntBASIC11.21□□□□□ -0.61
Col5a1O88207 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.21□□□□□ -0.61
Col5a1O88207 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.21□□□□□ -0.61
Col5a1O88207 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.21□□□□□ -0.61
Col5a1O88207 Gm10774-201ENSMUST00000188689 204 ntBASIC11.21□□□□□ -0.61
Col5a1O88207 Gm28071-201ENSMUST00000190355 478 ntBASIC11.21□□□□□ -0.61
Col5a1O88207 Gm9132-201ENSMUST00000210182 832 ntBASIC11.21□□□□□ -0.61
Col5a1O88207 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.21□□□□□ -0.61
Col5a1O88207 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Col5a1O88207 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col5a1O88207 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Col5a1O88207 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Col5a1O88207 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Gm8199-201ENSMUST00000121323 823 ntBASIC11.21□□□□□ -0.62
Col5a1O88207 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.21□□□□□ -0.62
Col5a1O88207 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.21□□□□□ -0.62
Col5a1O88207 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.21□□□□□ -0.62
Col5a1O88207 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.21□□□□□ -0.62
Col5a1O88207 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.21□□□□□ -0.62
Col5a1O88207 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Col5a1O88207 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col5a1O88207 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Col5a1O88207 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.2□□□□□ -0.62
Col5a1O88207 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col5a1O88207 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.2□□□□□ -0.62
Col5a1O88207 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Col5a1O88207 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col5a1O88207 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms