Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Pcdh1F7BJK1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Gm6152-201ENSMUST00000151704 340 ntBASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Gm42599-201ENSMUST00000201308 469 ntBASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Pcdh1F7BJK1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gm15429-201ENSMUST00000151268 798 ntBASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gm37917-201ENSMUST00000194711 392 ntBASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdh1F7BJK1 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdh1F7BJK1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdh1F7BJK1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdh1F7BJK1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdh1F7BJK1 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms