Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm37580-201ENSMUST00000192408 2800 ntBASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm27321-201ENSMUST00000185021 205 ntBASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm7063-201ENSMUST00000186840 981 ntBASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Gm44831-201ENSMUST00000208469 2989 ntBASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav3n-3A0A0G2JEM0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms