Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Gm8463-201ENSMUST00000208573 613 ntBASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
H2afb3S4R1G7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm14921-201ENSMUST00000118643 908 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm8515-201ENSMUST00000194852 576 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
H2afb3S4R1G7 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms