Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm14704-201ENSMUST00000120300 874 ntBASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm12291-201ENSMUST00000121627 311 ntBASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm7029-201ENSMUST00000173226 450 ntBASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm19163-201ENSMUST00000223313 780 ntBASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClcnkaQ9WUB7 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Gm40466-201ENSMUST00000212174 422 ntBASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Gm10268-201ENSMUST00000085340 555 ntBASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClcnkaQ9WUB7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Gm13829-201ENSMUST00000119600 138 ntBASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Gm1335-201ENSMUST00000121653 386 ntBASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Gm27682-201ENSMUST00000183930 110 ntBASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Gm4768-201ENSMUST00000206199 686 ntBASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClcnkaQ9WUB7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms