Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem54Q9D7S1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem54Q9D7S1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem54Q9D7S1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem54Q9D7S1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Tmem54Q9D7S1 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.08□□□□□ -0.64
Tmem54Q9D7S1 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gm10434-201ENSMUST00000101158 471 ntBASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gm13786-201ENSMUST00000122371 333 ntBASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gm7399-201ENSMUST00000032395 858 ntBASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gm26035-201ENSMUST00000083065 308 ntBASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Tmem54Q9D7S1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Rmrp-201ENSMUST00000157463 271 ntBASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Olfr284-202ENSMUST00000206647 966 ntBASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Tmem54Q9D7S1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms