Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lsm7Q9CQQ8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Gm11930-201ENSMUST00000117788 190 ntBASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Gm15808-201ENSMUST00000119046 604 ntBASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lsm7Q9CQQ8 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Gm14999-201ENSMUST00000121039 624 ntBASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Gm15276-201ENSMUST00000145953 498 ntBASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lsm7Q9CQQ8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lsm7Q9CQQ8 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms