Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh15Q99PJ1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm44315-201ENSMUST00000203041 219 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm18514-201ENSMUST00000218980 436 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm14807-201ENSMUST00000116640 983 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm12943-201ENSMUST00000119616 210 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm11979-201ENSMUST00000119629 743 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm5257-201ENSMUST00000121823 790 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm17070-201ENSMUST00000170463 784 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm5706-201ENSMUST00000181525 993 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Gm2553-201ENSMUST00000215986 605 ntBASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdh15Q99PJ1 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Gm11470-201ENSMUST00000118868 1475 ntBASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Gm9136-201ENSMUST00000193368 454 ntBASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Gm18561-201ENSMUST00000206027 804 ntBASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Gm30671-201ENSMUST00000214898 318 ntBASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdh15Q99PJ1 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm5340-201ENSMUST00000203733 880 ntBASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 AC164618.2-201ENSMUST00000224770 573 ntBASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms