Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Proscos-202ENSMUST00000178990 666 ntBASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gm24196-201ENSMUST00000179161 110 ntBASIC16.67■□□□□ 0.26
Rtn4Q99P72 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gm38341-201ENSMUST00000195357 515 ntBASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gm42430-201ENSMUST00000197209 616 ntBASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gm43550-201ENSMUST00000200597 303 ntBASIC16.67■□□□□ 0.26
Rtn4Q99P72 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 AL589696.1-201ENSMUST00000225711 330 ntBASIC16.67■□□□□ 0.26
Rtn4Q99P72 AC121567.1-201ENSMUST00000227213 842 ntBASIC16.67■□□□□ 0.26
Rtn4Q99P72 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gm37324-201ENSMUST00000194500 4504 ntBASIC16.67■□□□□ 0.26
Rtn4Q99P72 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtn4Q99P72 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm13369-201ENSMUST00000119442 987 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm12105-201ENSMUST00000120846 779 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm12403-201ENSMUST00000121384 959 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm2639-201ENSMUST00000156881 1297 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Snora78-201ENSMUST00000158630 128 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm33571-201ENSMUST00000193271 657 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm17330-201ENSMUST00000221047 165 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 AC154245.1-201ENSMUST00000224615 601 ntBASIC16.66■□□□□ 0.26
Rtn4Q99P72 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rtn4Q99P72 AC164426.2-201ENSMUST00000225993 2492 ntBASIC16.65■□□□□ 0.26
Rtn4Q99P72 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn4Q99P72 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.65■□□□□ 0.26
Rtn4Q99P72 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn4Q99P72 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rtn4Q99P72 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn4Q99P72 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn4Q99P72 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn4Q99P72 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn4Q99P72 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rtn4Q99P72 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms